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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842090.1_cds_XP_016508239.1_21282
CDS Infomation

[gene=LOC107825840] [db_xref=GeneID:107825840] [protein=probable indole-3-pyruvate monooxygenase YUCCA8] [protein_id=XP_016508239.1] [location=complement(join(7649..7867,7964..8335,8426..9076))] [gbkey=CDS]
Sequence

ATGTTTAGTTTCTCAGATAACGATTTCTTTGCTCGTAGATGTGTTTGGGTAAATGGTCCT
GTAATTGTTGGTGGAGGTCCATCAGGATTAGCAGTTGGAGCTTGTTTAAAAGAACAAGGA
GTTCCTTGTGTTATCTTGGAAAGAACTGATTGTATTGCTTCTTTATGGCAAAAAAGAACT
TATGATCGTTTGAAACTTCATCTCCCTAAGAAATTCTGTCAACTCCCAAATTTCCCATTT
CCAGAACACTACCCTGAGTACCCTACAAAGAGACAATTCATTGATTATCTTGAATCCTAT
GCCAAGAAATTTGACCTCAAACCACAGTTCAATGAGTGTGTACAATCTGCTAAGTACGAC
GAAGCTTGTCGCTTGTGGAGGGTAAAAACTGTTTCAGGAAATGGCTCTGAAGTTGAATAT
ATTTGTCAGTGGCTTGTTGTTGCTACTGGTGAAAATGCTGAAAGAGTTGTGCCTGAAATT
GATGGGTTGAAAAATTTCGGAGGTGAAGTAATTCATGCTTGTGAGTACAAGTCTGGTGAC
AAATTTCGGGGAAAGAAAGTTCTTGTTGTAGGCTGTGGAAATTCTGGCATGGAAGTTTCA
CTTGATCTCAGTAATCATGATGCTCAACCATCAATGGTTTGCCGTAGCTCGGTTCATGTT
TTGCCAAGAGAGATTTTTGGGAAATCAACATTTGAGCTGGCTATGATATTAATGGCATGG
CTACCACTTTGGCTAGTTGACAAAATTCTACTTATTCTAACATGGTTTATTCTTGGAAAT
ATTGAGAGTTATGGACTAAAAAGGCCATCAATTGGACCATTAACACTCAAAAATACACAA
GGAAAAACCCCTGTACTTGACATTGGTGCTTTGGAAAAAATCAGATCAGGAAAAGTTAAG
GTTGTACCAGGAATTAAAAAGTTCAATTGTGGCACTGTTGAACTTGTTAATGGTGAAACA
CTTGATGTTGATTCAGTTGTTTTGGCTACTGGCTACTGCAGCAATGTTCCTTACTGGCTA
CAGGAAAGTGAATTTTTCTCAAAGAATGGATTTCCCAAGGCACAAAATAACTGGAAAGGA
AAATCTGGGCTATATGCAGTTGGATTTACAGGGAGAGGGCTGGCTGGTGCTTCTGCTGAT
GCTATCAGAATTGCTAAAGATATTGGCAAAGTACATCAAGAAGATCTTAAACAAAAGAAG
CAAAAAGTTCCAACACACAGACGTTGCATCTCTACCTTTTAA

Peptide Sequence

PEP ID

XP_016508239.1
PEP Infomation

PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA8 [Nicotiana tabacum]
Sequence

MFSFSDNDFFARRCVWVNGPVIVGGGPSGLAVGACLKEQGVPCVILERTDCIASLWQKRT
YDRLKLHLPKKFCQLPNFPFPEHYPEYPTKRQFIDYLESYAKKFDLKPQFNECVQSAKYD
EACRLWRVKTVSGNGSEVEYICQWLVVATGENAERVVPEIDGLKNFGGEVIHACEYKSGD
KFRGKKVLVVGCGNSGMEVSLDLSNHDAQPSMVCRSSVHVLPREIFGKSTFELAMILMAW
LPLWLVDKILLILTWFILGNIESYGLKRPSIGPLTLKNTQGKTPVLDIGALEKIRSGKVK
VVPGIKKFNCGTVELVNGETLDVDSVVLATGYCSNVPYWLQESEFFSKNGFPKAQNNWKG
KSGLYAVGFTGRGLAGASADAIRIAKDIGKVHQEDLKQKKQKVPTHRRCISTF

Transcript Sequence

Gene sequence data has not been registered.